An R package for analyzing miRNA-mRNA interactions
This package combines biological information (expression data) with theoretical information (miRNA target prediction databases) in order to obtain a curated list of potential miRNA-mRNA interaction pairs.
Vila-Casadesús M, Gironella M, Lozano JJ. MiRComb: An R Package to Analyse miRNA-mRNA Interactions. Examples across Five Digestive Cancers. PLoS ONE 11(3): e0151127, 2016.
The latest version of the package is available in GitHub, but you can also find older versions in SourceForge (for Linux, Windows and Mac users). It has been published in PLOS ONE. If you find it interesting please help us to improve it by sending any comments or suggestions to email@example.com or firstname.lastname@example.org. Many thanks!
*NEW* MiRData package has been updated and now it contains databases for mouse targets.